How to Fix QuickBooks Web Connector Error QBWC1039?

Published Date: January 22, 2023   Updated Date: April 28, 2025

QuickBooks Web Connector Error QBWC1039

QuickBooks Web Connector Error QBWC1039 occurs when users face difficulties connecting third-party applications to QuickBooks. This error is triggered by various issues, such as a moved or renamed company file, compatibility problems with third-party apps, or changes in file location. In some cases, the QuickBooks administrator may not have allowed third-party app integration, leading to this error. Error QBWC1039 can display different messages, such as access denial or missing file IDs, depending on the cause.

To fix the error, identifying the underlying issue is crucial. Common early signs include failed attempts to integrate applications, an inaccessible company file, or error messages related to file IDs or permissions. Once the cause is identified, users can apply specific solutions, such as restoring backup files or adjusting application permissions. Check out these 8 methods to fix QuickBooks Error Code QBWC1039 to ensure smooth processing of the software.

Method 1: Configure Web Connector to Run When QuickBooks is Closed

Configuring Web Connector ensures that the Web Connector operates smoothly without interfering with your work. Here are the steps to configure web connector:

  1. Sign in to QuickBooks as an admin user.
  2. In case you’re using multi-user mode, go to the File menu and select “Switch to Single-User Mode.”
  3. From the Edit menu, select “Preferences.”
  4. Choose “Integrated Applications” and click the “Company Preferences” tab.
  5. Select the third-party app and click “Properties.”
  6. Enable automatic login for the application.
  7. In the authorization window, click “Yes.”
  8. Choose the user to log in and click “OK.”

Method 2: Unique OwnerID/FileID Pair Value Required

Using the CP3 tool resolves ID issues and restores proper access to the company file. Check out these steps.

  1. Open QuickBooks and download the CP3 tool.
  2. Launch the CP3 tool and click the “File” option.
  3. Locate the QWC file and enter the QBC file location.
  4. Open the file and click “Remove Stamp.”
  5. A warning message will appear; click “Yes.”
  6. Click the “Continue” tab and then “OK” in the access confirmation window.
  7. Follow the on-screen prompts and click “OK.”
  8. After the confirmation message appears, click “OK.”
  9. Close the CP3 tool and add the third-party app.

Method 3: Fix Permission Issues in Accessing the Company File

Resolving permission issues allows the third-party app to integrate seamlessly with QuickBooks. Here are the steps to provide required permission to access the company file. 

  1. Sign in to QuickBooks as an admin.
  2. In case QuickBooks is in multi-user mode, go to the File menu and switch to Single-User Mode.
  3. From the Edit menu, select “Preferences.”
  4. Choose “Integrated Applications” and go to the “Company Preferences” tab.
  5. Uncheck the box that says “Don’t allow any application to access this company file.”
  6. In the SDK app authorization, click “Yes.”
  7. Allow access for the third-party application.
  8. Click “OK” to complete the process.

Method 4: Change the Name of the Company File

Renaming the company file restores correct access, resolving errors caused by file location or name changes. Enlisted below are the steps: 

  1. Open QuickBooks and press F2 or Ctrl + 1 to open the information window.
  2. Note the file location from the “File Information” field.
  3. Click the Start tab.
  4. For Windows 8, select File Explorer; for other versions, select Windows Explorer.
  5. Right-click the company file and choose “Rename.”
  6. Press Enter to confirm the name change.
  7. Click “Yes” to confirm the action.
  8. Open QuickBooks and set up the new file name.
  9. Go to the File menu, open the company file, and click “Next” to access the renamed file.

Method 5: Restore the Backup File to the Previous Location

Restoring the backup ensures the file returns to its correct location, resolving access-related issues. Follow these steps:

  1. Launch QuickBooks and click on the File menu.
  2. Select “Open or Restore Company” and choose “Restore a Backup Copy.”
  3. Click “Next” and select the “Local Backup” tab.
  4. Click “Next” again and browse to find the backup company file.
  5. Choose a folder to save the restored file.
  6. Save the file with a unique name to avoid overwriting the current company file.
  7. Open and save the restored company file.
  8. In case the file was saved on an external location like a USB, move it to the local hard drive before starting these steps.

Method 6: Create a Backup Company File

Creating a backup protects your data and allows you to restore the company file if something goes wrong. Follow the step-by-step guide given below:

  1. Open QuickBooks and the company file.
  2. Switch to Single-User Mode.
  3. Click the File menu and select “Create a Backup Company.”
  4. Choose “Create Local Backup” and select the “Local Backup” option.
  5. Click the “Options” tab to open the backup window.
  6. Click the “Browse” tab and select the local hard drive location for the backup.
  7. Click “OK” and save the backup file.

Method 7: Update QuickBooks to the Latest Release to Fix QBWC1039

Updating QuickBooks ensures compatibility with the latest features and resolves any software bugs causing the error. Check out these steps.

  1. Download the latest QuickBooks update from the Intuit website.
  2. Save the file in an easily accessible location.
  3. Right-click the file and select “Run as Administrator” to start the installation.
  4. Click “Finish” after the installation is complete.
  5. Restart your system to complete the update.
  6. QuickBooks will now be updated to the latest release, ready for use.

What are the Prerequisites to Fix QuickBooks Web Connector Error QBWC1039?

Before you start fixing the QuickBooks Error Code QBWC1039, ensure to meet the given prerequisites:

  • Ensure you have admin access to QuickBooks.
    Make sure QuickBooks is in Single-User Mode, not Multi-User Mode.
  • Have access to the QuickBooks company file and its location.
  • Confirm the third-party application causing the issue is installed correctly.
  • Check that QuickBooks is updated to the latest version.
  • Backup the company file to avoid data loss before making any changes.
  • Make sure the company file is accessible without any permissions issues.

How to Identify QuickBooks Web Connector Error QBWC1039?

You can identify Error QBWC1039 by acknowledging the presence of following signs:

  • Error typically occurs when connecting third-party apps to QuickBooks.
  • Check for error messages such as “Access Denied” or “Missing File ID”. 
  • Look for the message about the company file not granting access to the app.
  • Notice if QuickBooks repeatedly fails to integrate with the application.
  • Pay attention to errors related to file name changes or relocation of the company file.
  • Observe issues with integration permissions, especially if QuickBooks is in multi-user mode.

How to Prevent QuickBooks Web Connector Error QBWC1039?

To avoid facing QuickBooks Error Code QBWC1039, follow the given preventive tips:

  • Always keep QuickBooks updated to the latest version.
  • Regularly check and back up your company file to prevent data loss.
  • Ensure proper permissions are set for third-party app access in QuickBooks.
  • Avoid renaming or moving the company file without restoring it to its original location.
  • Confirm that QuickBooks is set to Single-User Mode for third-party integrations.
  • Verify that the third-party application is compatible with your QuickBooks version.
  • Periodically review your third-party app integrations for any issues or updates.

When Should You Seek Professional Help for QuickBooks Web Connector Error QBWC1039?

Seek professional help for QuickBooks Web Connector Error QBWC1039 when the provided solutions don’t resolve the issue. An expert can save you time and effort by efficiently addressing the error. Additionally, they ensure no data loss occurs during the troubleshooting process, offering peace of mind. If you’re unsure about handling the error yourself, reaching out to a trained support team can provide the expertise needed to fix the problem without further complications.

Hire QuickBooks Web Connector Error QBWC1039 Resolution Services

Hiring professional services for QuickBooks Web Connector Error QBWC1039 can save you time and reduce the risk of data loss. Many users opt for expert help due to limited technical knowledge, concerns about making mistakes, or a lack of time. At Dancing Numbers, we provide efficient solutions to fix your issues. Our skilled team is ready to assist with technical problems, functionality, and data migration errors. Get in touch with us to fix QuickBooks Error by
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